Nature Methods

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12.02.2025

Segment Anything for Microscopy

Authors Archit A, Freckmann L, Nair S, Khalid N, Hilt P, Rajashekar V, Freitag M, Teuber C, Buckley G, von Haaren S, Gupta S, Dengel A, Ahmed S, Pape C Journal Nature Methods Citation Nat Methods. 2025 Feb 12. Abstract Accurate segmentation of objects in microscopy images remains a bottleneck
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04.01.2024

Image restoration of degraded time-lapse microscopy data mediated by near-infrared imaging

Authors Gritti N, Power RM, Graves A, Huisken J Journal Nature Methods Citation Nat Methods (2024). Abstract Time-lapse fluorescence microscopy is key to unraveling biological development and function; however, living systems, by their nature, permit only limited interrogation and contain untapped information that can only be captured by more invasive
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01.09.2022

DNA-PAINT MINFLUX nanoscopy

Authors Ostersehlt LM, Jans DC, Wittek A, Keller-Findeisen J, Inamdar K, Sahl SJ, Hell SW, Jakobs S Journal Nature Methods Citation Nat Methods (2022). Abstract MINimal fluorescence photon FLUXes (MINFLUX) nanoscopy, providing photon-efficient fluorophore localizations, has brought about three-dimensional resolution at nanometer scales. However, by using an intrinsic on–off switching
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21.10.2021

Deep learning improves macromolecule identification in 3D cellular cryo-electron tomograms

Authors Moebel E, Martinez-Sanchez A, Lamm L, Righetto RD, Wietrzynski W, Albert S, Larivière D, Fourmentin E, Pfeffer S, Ortiz J, Baumeister W, Peng T, Engel BD, Kervrann C Journal Nature Methods Citation Nat Methods. 2021 Oct 21. Abstract Cryogenic electron tomography (cryo-ET) visualizes the 3D spatial distribution of macromolecules
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04.02.2021

Multi-particle cryo-EM refinement with M visualizes ribosome-antibiotic complex at 3.7 Å inside cells

Authors Tegunov D, Xue L, Dienemann C, Cramer P, Mahamid J Journal Nature Methods Citation Nat Methods 18, 186–193 (2021). Abstract Cryo-electron microscopy (cryo-EM) enables macromolecular structure determination in vitro and inside cells. In addition to aligning individual particles, accurate registration of sample motion and three-dimensional deformation during exposures are
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